Thursday, November 27, 2025

AI spots signatures of earliest life on Earth—and now turns to other worlds

Amazing stuff!

"... Now, researchers have devised an artificial intelligence (AI) that can identify signs of ancient life in rocks of unknown provenance, based only on the pattern of chemicals left behind as biomolecules degrade over eons.

Using this automated pattern recognition technique, the researchers say they can see life’s signature in 3.3-billion-year-old rocks, which pre-dates Earth’s oldest fossils by hundreds of millions of years.
But the new work also claims to push back the biomolecular signature of the earliest photosynthetic life some 800 million years to 2.5 billion years ago. Researchers are now working to adapt this approach to search for signs of life on Mars and moons of Jupiter and Saturn. ..."

From the significance and abstract:
"Significance
Teasing out biochemical information from ancient organic-rich sediments, notably the timing of the emergence of photosynthesis relative to the inferred oxygenation of Earth’s atmosphere, remains a challenging opportunity.
To tackle this problem, we analyzed 406 diverse ancient and modern samples and used supervised machine learning to discriminate samples of biogenic vs. abiogenic origin, as well as photosynthetic vs. nonphotosynthetic physiology. Comparing organic-rich samples of uncertain affinity to our training data, ca. 3.33-billion-year-old sedimentary rocks group among microbial samples, and rocks as old as 2.52 billion years ally with more recent photosynthetic life. The application of supervised machine learning thus approximately doubles the interval within which fossil organic matter can be shown to retain molecular information of evolutionary relationships and physiology.

Abstract
Throughout Earth’s history, organic molecules from both abiogenic and biogenic sources have been buried in sedimentary rocks. Most of these organic molecules have been significantly altered by geologic processes through deep time. Nonetheless, the nature and distribution of those ancient fragmentary organic remains have the potential to reveal diagnostic biomolecular information after billions of years of burial.
Here, we analyzed 406 fossil, modern biological, meteoritic, and synthetic samples using pyrolysis gas chromatography and mass spectrometry. We explored these analytical data via supervised machine-learning methods to discriminate samples of biogenic vs. abiogenic origin, plant vs. animal phylogenetic affinity, and photosynthetic vs. nonphotosynthetic physiology. Dividing 272 samples with known phylogenetic affinity and physiology into 9 categories, each further divided into 75% training and 25% testing sets, our random forest models accurately predict pairwise assignments of modern vs. fossil or meteoritic organics (100% correct assignments), fossil plant tissues vs. meteoritic organics (97%), modern vs. fossil plant tissues (98%), and modern plants vs. animal tissues (95%).
Pairwise comparisons between fossil biogenic samples vs. abiogenic samples resulted in 93% correct classifications, while analysis of modern and ancient photosynthetic vs. nonphotosynthetic samples also resulted in 93% correct assignments.
Our analyses demonstrate that molecular biosignatures can survive in ancient fossils and allow for the identification of organismal origins and traits. Consistent with previous morphological and isotopic inferences, we present evidence for biogenic molecular assemblages in Paleoarchean rocks (3.33 Ga) and for photoautotrophy in Neoarchean rocks (2.52 Ga)."

ScienceAdviser

Chemical evidence of ancient life detected in 3.3-billion-year-old rocks (original news release) "New study shows life’s signature still exists in rocks long after the original biomolecules are gone."




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