Amazing stuff! What lurks more than 10,000 meters below sea level?
"... Now, in a trio of papers published in Cell , scientists are shining a spotlight on the weird and wonderful organisms that inhabit this mysterious environment.
Between August and November 2021, scientists made dozens of trips to the Mariana Trench and surrounding regions in the Chinese submersible Fendouzhe, collecting samples of microbe-filled sediment, fish, and tiny shrimp-like crustaceans called amphipods. The new studies, all part of the Mariana Trench Environment and Ecology Research project, shed light on one of the planet’s most unexplored habitats: the hadal zone, which lies only within trenches and can reach down to 11,000 meters below sea level. Researchers identified over 7000 new microbial species in the Mariana Trench , 89% of which were previously unreported; they also discovered strategies that deep-sea fish and amphipods use to survive crushing pressure, darkness, and frigid temperatures.
When extremophile microbiologist Weishu Zhao traveled to the sea floor in Fendouzhe and switched on the sub’s lights, she found herself looking at “a profound and mysterious blue.” But the researchers also witnessed signs of human activity: plastic bags, beer bottles, soda cans, and even a nearly intact laundry basket—a sobering reminder that even Earth’s most remote places have been impacted by pollution."
"... For the new project, researchers used Fendouzhe ... describes as “an engineering marvel.” (The U.S. submersible Alvin, by comparison, can dive up to 6500 meters deep.) Capable of carrying three people to the very deepest parts of the ocean, the vessel is equipped with a pair of robotic arms and a sample basket, enabling it to collect hundreds of samples in a single dive. Between August and November 2021, Fendouzhe made dozens of dives in the Mariana Trench and neighboring regions, bringing back samples of microbe-filled sediment, fish, and tiny shrimplike crustaceans called amphipods. ...
Genetic analysis revealed that some have small, highly efficient genomes specialized for a few vital functions, whereas others have larger, more versatile genomes equipping them to deal with changing environmental conditions. Some species have genes that enable them to consume difficult-to-degrade substances such as carbon monoxide—an advantage in an environment with few other food sources. ...
In a second study, researchers report that amphipods may have adapted to this extreme environment by forming a symbiotic relationship with deep-sea bacteria, making them one of the hadal zone’s most abundant inhabitants, says study co-author and BGI researcher Shanshan Liu. Analysis of the crustaceans’ gut contents revealed high levels of Psychromonas bacteria, which the team suspects may help produce a compound called trimethylamine N-oxide. Found in many deep-sea organisms, the substance maintains the balance of fluids in the body and helps protect against the damaging effects of high pressure.
A third study found evidence that fish living at depths of 3 kilometers or more all share a genetic mutation that allows their cells to more efficiently transcribe genes into essential proteins, helping them quickly respond to stress brought on by pressure, cold, and darkness.
By studying the genomes of 11 species, the researchers were also able to determine when certain lineages first colonized the deep sea.
Eels, for example, may have taken the plunge about 100 million years ago, avoiding the mass extinction event 65 million years ago that wiped out the dinosaurs and many marine organisms living in shallower water.
Snailfish, meanwhile, might have ventured into deep-sea trenches about 20 million years ago, possibly coinciding with a period of tectonic upheaval. The deep sea may have served as an “ecological refuge” during environmental changes caused by dramatic temperature and oxygen fluctuations, says study co-author and BGI researcher Yue Song. ..."
From the highlights and abstract:
"Highlights
• Large-scale investigation of hadal sediments generated the MEER microbial dataset
• Reveals extraordinarily high proportion of unidentified microbial taxa in hadal zone
• Identify two hadal microbial adaptation strategies: streamlined and versatile
• Aromatic compound utilization and antioxidation emerge as key adaptations to hadal zone
Summary
Systematic exploration of the hadal zone, Earth’s deepest oceanic realm, has historically faced technical limitations. Here, we collected 1,648 sediment samples at 6–11 km in the Mariana Trench, Yap Trench, and Philippine Basin for the Mariana Trench Environment and Ecology Research (MEER) project. Metagenomic and 16S rRNA gene amplicon sequencing generated the 92-Tbp MEER dataset, comprising 7,564 species (89.4% unreported), indicating high taxonomic novelty. Unlike in reported environments, neutral drift played a minimal role, while homogeneous selection (HoS, 50.5%) and dispersal limitation (DL, 43.8%) emerged as dominant ecological drivers. HoS favored streamlined genomes with key functions for hadal adaptation, e.g., aromatic compound utilization (oligotrophic adaptation) and antioxidation (high-pressure adaptation).
Conversely, DL promoted versatile metabolism with larger genomes. These findings indicated that environmental factors drive the high taxonomic novelty in the hadal zone, advancing our understanding of the ecological mechanisms governing microbial ecosystems in such an extreme oceanic environment."
ScienceAdviser
Extremophile Zhao Weishu, a woman who likes great depth with her instrument
Figure 1 Sampling and extraordinary novelty of the Deepest Ocean microbiome revealed by the MEER dataset